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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015791652.1_cds_XP_016508377.1_2073
CDS Infomation

[gene=LOC107825954] [db_xref=GeneID:107825954] [protein=alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial-like] [protein_id=XP_016508377.1] [location=complement(join(30726..30769,30857..30943,31041..31154,31301..31526,31950..32129,32252..32395,33438..33608,33707..33937,34278..34529))] [gbkey=CDS]
Sequence

ATGCAGAGATTCATCCCCAAAAGGGCGCTGTTGCGAAAAAATCAGTCCCAGTCCTTGTTC
AGTTGTCGACCCAATTCCTCAGTTGCGCAATCTTGCACGTCTCTTCATCAACAAGAAGAT
GACACATCACTTCCCAAAATGCCCCCTTTTGATTATACTCCTCCGCCTTACACCGGTCCC
TCCGCCCATGAAATCCATCTCAAACGCCAAACTTATCTCAACCCAGCCATCTTCCATTTT
TACAACAAGCCCTTGAATTTGGTGGATGGGAAGATGCAGTATTTGTATGACGAAAATGGG
CGGAGATATCTAGATGCATTTGGAGGGATTGCTACAGTGTGTTGTGGGCATTGCCACCCT
GAGGTGGTTGAATCAATTGTTAATCAAACAAAGCGTTTGCAGCACTCCACTGTTTTGTAT
TTGAATCATGCTGTAGCTGATTTTGCTGAGGCACTTGCATCCAAGTTGCCTGGAGATCTC
AAGGTTGTCTTCTTTACAAATTCGGGCACGGAGGCGAATGAGTTGGCTTTGATGATGGCA
CGGTTGCACACTGGTTGCCAAGATGTTATTTCGCTTAGGAATGGCTATCATGGCAATGCT
GCTGGGACAATGGGTTCCACTGCCCAGTCTAGCTACAAGTTCAATGTTGTACAGACTGGA
GTTCACCATGCCCTGAACCCTGATCAATATAGAGGTGTGTTTGGTTCAAACGGACTAAAA
TATGCGAGGGATTTAGATGATTTGATCACCTATGGAACCAGTGGTCGTGTGGCTGGTTTT
ATTGCAGAAGCTATACAGGGAGTGGGCGGGATTTTGGAGCTGGCCCCAGGATACTTGCCA
GCGGTCTATGACAAAGTCAGAAAGGCAGGAGGCATTTGCATAGCTGATGAGGTCCAGTCG
GGATTTGCTCGGACAGGGAGCCACTTTTGGGGATTTGAAGGTCACGGTGTCGTGCCTGAT
ATTGTTACCATGGCAAAGGGCATTGGAAATGGCATCCCACTTGGTGCTGTGGTCACCACA
CCCGAGATTGCAAAGGTCCTGACTAATCGCAGTTATTTCAACACCTTCGGCGGTAATCCT
GTGTGTACTGCTGGGGGGCTAGCAGTTCTCAGAGTAATTGAAAAAGAGAAGCTTCAGCAA
AATGCATTCAATGTCGGATCATATCTTAAAAACCGGCTTACTTCTCTAATGGAGAAACAT
GAAATTATTGGTGATGTGAGGGGAAGAGGTCTGATGCTTGGCGTTGAGCTGGTTACTGAT
AGACAGTCAAAAACTCCAGCTAAGGTGGAAATATTGCGAGTAATGGAGCAGATGAAAGAA
ATGGGAGTCCTCATTGGAAAAGGAGGATTTTATGGCAATGTTTTTAGGGTTACTCCTCCT
CTCTGCTTCACCAAGGAAGATGCAGATTTTCTCGTTGATGTGATGGATTACTCAATGTCA
AAGATGTGA

Peptide Sequence

PEP ID

XP_016508377.1
PEP Infomation

PREDICTED: alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial-like [Nicotiana tabacum]
Sequence

MQRFIPKRALLRKNQSQSLFSCRPNSSVAQSCTSLHQQEDDTSLPKMPPFDYTPPPYTGP
SAHEIHLKRQTYLNPAIFHFYNKPLNLVDGKMQYLYDENGRRYLDAFGGIATVCCGHCHP
EVVESIVNQTKRLQHSTVLYLNHAVADFAEALASKLPGDLKVVFFTNSGTEANELALMMA
RLHTGCQDVISLRNGYHGNAAGTMGSTAQSSYKFNVVQTGVHHALNPDQYRGVFGSNGLK
YARDLDDLITYGTSGRVAGFIAEAIQGVGGILELAPGYLPAVYDKVRKAGGICIADEVQS
GFARTGSHFWGFEGHGVVPDIVTMAKGIGNGIPLGAVVTTPEIAKVLTNRSYFNTFGGNP
VCTAGGLAVLRVIEKEKLQQNAFNVGSYLKNRLTSLMEKHEIIGDVRGRGLMLGVELVTD
RQSKTPAKVEILRVMEQMKEMGVLIGKGGFYGNVFRVTPPLCFTKEDADFLVDVMDYSMS
KM

Transcript Sequence

Gene sequence data has not been registered.